{"id":30,"date":"2016-03-26T10:44:03","date_gmt":"2016-03-26T14:44:03","guid":{"rendered":"http:\/\/elements.chem.umass.edu\/youlab\/?page_id=30"},"modified":"2017-05-12T08:08:50","modified_gmt":"2017-05-12T12:08:50","slug":"resources","status":"publish","type":"page","link":"https:\/\/elements.chem.umass.edu\/youlab\/resources\/","title":{"rendered":"Resources"},"content":{"rendered":"<h4>UMass Amherst<\/h4>\n<ul>\n<li><a href=\"https:\/\/www.amherstma.gov\/319\/About-Amherst\">About Amherst<\/a>:\u00a0official website<\/li>\n<li><a href=\"http:\/\/www.umass.edu\/visitorsctr\/directions\/\">Directions to UMass Amherst Campus<\/a><\/li>\n<li><a href=\"http:\/\/www.umass.edu\/cbi\/\">Chemistry-Biology Interface Program\u00a0(CBI)<\/a><\/li>\n<li><a href=\"http:\/\/gpls.cns.umass.edu\/mcb\">Molecular &amp; Cellular Biology Program (MCB)<\/a><\/li>\n<li><a href=\"https:\/\/www.library.umass.edu\/collections\/\">UMass Amherst Library Databases &amp; Collections<\/a><\/li>\n<li><a href=\"http:\/\/www.it.umass.edu\/\">UMass Amherst Information Technology<\/a><\/li>\n<li><a href=\"http:\/\/www.ehs.umass.edu\/fact-sheets\">UMass Amherst Environmental Health &amp; Safety Fact Sheets<\/a><\/li>\n<li><a href=\"http:\/\/crc.chem.umass.edu\/\">Chemistry Computer Resource Center<\/a><\/li>\n<li><a href=\"https:\/\/people.chem.umass.edu\/chembooking\/month.php?year=2016&amp;month=3&amp;day=28&amp;area=1\">Chemistry Booking System<\/a><\/li>\n<\/ul>\n<h4>Journals<\/h4>\n<ul>\n<li><a href=\"http:\/\/science.sciencemag.org\/\">Science<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nature\/current_issue.html\">Nature<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nbt\/research\/index.html?articles=aop\">Nature Biotechnology<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nnano\/research\/index.html?articles=aop\">Nature Nanotechnology<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nchem\/research\/index.html\">Nature Chemistry<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nmeth\/research\/index.html\">Nature Methods<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/nchembio\/index.html\">Nature Chemical Biology<\/a><\/li>\n<li><a href=\"http:\/\/www.nature.com\/ncomms\/\">Nature Communications<\/a><\/li>\n<li><a href=\"http:\/\/pubs.acs.org\/journal\/jacsat\">Journal of the American Chemical Society<\/a><\/li>\n<li><a href=\"http:\/\/onlinelibrary.wiley.com\/journal\/10.1002\/(ISSN)1521-3773\/earlyview\">Angewandte Chemie International Edition<\/a><\/li>\n<\/ul>\n<h4>Softwares and Servers<\/h4>\n<ul>\n<li><a href=\"http:\/\/www.nupack.org\/partition\/new\">NUPACK<\/a>: analysis and design of nucleic acid structures<\/li>\n<li><a href=\"http:\/\/unafold.rna.albany.edu\/?q=mfold\/RNA-Folding-Form\">mFold<\/a>\u00a0&amp; <a href=\"http:\/\/unafold.rna.albany.edu\/\">UNAFold<\/a>: nucleic acid folding and hybridization prediction<\/li>\n<li><a href=\"http:\/\/rna.informatik.uni-freiburg.de\/LocARNA\/Input.jsp\">LocARNA<\/a>: RNA alignment and folding<\/li>\n<li><a href=\"http:\/\/biotools.nubic.northwestern.edu\/OligoCalc.html\">OligoCalc<\/a>: DNA\/RNA properties calculator<\/li>\n<li><a href=\"http:\/\/kinefold.curie.fr\/\">KineFold<\/a>: animating RNA folding<\/li>\n<li><a href=\"http:\/\/cadnano.org\/\">caDNAno<\/a>: DNA origami design program<\/li>\n<li><a href=\"http:\/\/cando-dna-origami.org\/\">CanDo<\/a>: predicting 3D shape and flexibility of programmed DNA assembly<\/li>\n<li><a href=\"http:\/\/daedalus-dna-origami.org\/about\/\">DAEDALUS<\/a>: DNA origami sequence design algorithm for user-defined structures<\/li>\n<li><a href=\"https:\/\/binkley2.ncifcrf.gov\/users\/bshapiro\/software.html\">NanoTiler<\/a>: design of RNA nanostructure<\/li>\n<li><a href=\"https:\/\/binkley2.ncifcrf.gov\/users\/bshapiro\/rna2d3d\/rna2d3d.html\">RNA2D3D<\/a>:\u00a0convert RNA 2D structures to 3D modeling<\/li>\n<li><a href=\"http:\/\/www.snapgene.com\/products\/snapgene_viewer\/\">SnapGene<\/a>: plasmid map editor<\/li>\n<li><a href=\"http:\/\/biologylabs.utah.edu\/jorgensen\/wayned\/ape\/\">ApE<\/a>: another plasmid map editor<\/li>\n<li><a href=\"http:\/\/www.eternagame.org\/web\/\">EteRNA<\/a>: a browser-based game to solve puzzles about RNA folding<\/li>\n<li><a href=\"https:\/\/scinote.net\/\">sciNote<\/a>: free open source electronic lab notebook<\/li>\n<\/ul>\n<h4>Database and Protocols<\/h4>\n<ul>\n<li><a href=\"http:\/\/ndbserver.rutgers.edu\/\">Nucleic Acid Database<\/a>:\u00a0experimentally-determined 3D nucleic acids and complex assemblies<\/li>\n<li><a href=\"https:\/\/rnajunction.ncifcrf.gov\/\">RNAJunction<\/a>: database for RNA junction and kissing loop<\/li>\n<li><a href=\"http:\/\/rfam.xfam.org\/\">Rfam<\/a>: RNA families database<\/li>\n<li><a href=\"http:\/\/bionumbers.hms.harvard.edu\/\">Bionumbers<\/a>: database of useful biological numbers<\/li>\n<li><a href=\"http:\/\/www.benchfly.com\/\">Benchfly<\/a>: science video platform with many useful protocols and techniqeus<\/li>\n<li><a href=\"http:\/\/www.jove.com\/\">JoVE<\/a>: Journal of Visualized Experiments, with movies for\u00a0many detailed protocols and\u00a0techniques<\/li>\n<li><a href=\"http:\/\/www.protocol-online.org\/\">Protocol Online<\/a>: protocols and forum discussion<\/li>\n<li><a href=\"https:\/\/www.neb.com\/tools-and-resources#tabselect0\">NEB Tools &amp; Resources<\/a>: New England Biolabs<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>UMass Amherst About Amherst:\u00a0official website Directions to UMass Amherst Campus Chemistry-Biology Interface Program\u00a0(CBI) Molecular &amp; Cellular Biology Program (MCB) UMass Amherst Library Databases &amp; Collections UMass Amherst Information Technology UMass Amherst Environmental Health &amp; Safety Fact Sheets Chemistry Computer Resource &hellip;<\/p>\n<p class=\"read-more\"> <a class=\"more-link\" href=\"https:\/\/elements.chem.umass.edu\/youlab\/resources\/\"> <span class=\"screen-reader-text\">Resources<\/span> Read More &raquo;<\/a><\/p>\n","protected":false},"author":50,"featured_media":0,"parent":0,"menu_order":6,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-30","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/pages\/30","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/users\/50"}],"replies":[{"embeddable":true,"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/comments?post=30"}],"version-history":[{"count":31,"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/pages\/30\/revisions"}],"predecessor-version":[{"id":744,"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/pages\/30\/revisions\/744"}],"wp:attachment":[{"href":"https:\/\/elements.chem.umass.edu\/youlab\/wp-json\/wp\/v2\/media?parent=30"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}